Topological Data Analysis for Characterizing Phase Transitions in High-Dimensional Random Graph Models Using Persistent Homology and Machine Learning Techniques

 

Table Of Contents


Chapter ONE

INTRODUCTION

  • 1.1Introduction
  • 1.2Background of Study
  • 1.3Problem Statement
  • 1.4Objective of Study
  • 1.5Limitation of Study
  • 1.6Scope of Study
  • 1.7Significance of Study
  • 1.8Structure of the Research
  • 1.9Definition of Terms

Chapter TWO

LITERATURE REVIEW

  • 2.1Survey of Topological Data Analysis (TDA): Foundations and Tools
  • 2.2Persistent Homology: Theory and Computation
  • 2.3Random Graph Models and Phase Transitions
  • 2.4High-Dimensional Data Representations
  • 2.5Manifold Learning and Geometric Topology in Data
  • 2.6Machine Learning Methods for Topological Features
  • 2.7Stability and Robustness in TDA
  • 2.8Applications of TDA in Complex Networks
  • 2.9Limitations and Gaps in Current Literature

Chapter THREE

RESEARCH METHODOLOGY

  • 3.1Research Design and Philosophical Underpinnings
  • 3.2Data Generation and Simulation Framework
  • 3.3Graph Models and Phase Transition Parameters
  • 3.4Construction of Vietoris–Rips Complexes and Simplicial Complexes
  • 3.5Computation of Persistent Homology and Barcode/ Persistence Diagrams
  • 3.6Feature Extraction from Topological Signatures
  • 3.7Integration with Machine Learning Classifiers and Regressors
  • 3.8Validation, Benchmarking, and Reproducibility
  • 3.9Parameter Tuning and Stability Analysis
  • 3.10Ethical Considerations and Data Handling

Chapter FOUR

DATA PRESENTATION AND ANALYSIS

  • 4.1Data Preprocessing and Experimental Setup
  • 4.2Description of Phase Transition Scenarios in Models
  • 4.3Topological Feature Engineering and Selection
  • 4.4Persistent Homology in High Dimensions: Computation Strategies
  • 4.5Dimensionality Reduction of Topological Signatures
  • 4.6Supervised Learning Results: Classification of Phases
  • 4.7Regression Analysis: Critical Threshold Estimation
  • 4.8Discussion of Findings: Relation Between Topology and Phase Transitions

Chapter FIVE

SUMMARY, CONCLUSION AND RECOMMENDATIONS

  • 5.1Summary of Findings
  • 5.2Theoretical Implications for Mathematics and Graph Theory
  • 5.3Practical Implications for Data Science and Network Analysis
  • 5.4Limitations of the Study and Potential Bias
  • 5.5Recommendations for Future Work
  • 5.6Conclusions and Final Remarks

Project Abstract

This study develops a novel framework combining topological data analysis (TDA), persistent homology, and machine learning to characterize phase transitions in high-dimensional random graph models. We address the challenge that traditional statistical indicators often fail to capture global structural changes in complex networks as they undergo critical transitions, especially in high-dimensional regimes where connectivity patterns become intricate and multi-scale. Our approach constructs affine-invariant filtrations of graphs via edge- and vertex-weighted simplicial complexes derived from multi-parameter random graph ensembles, enabling robust extraction of topological signatures across scales. We compute persistent features such as Betti curves, persistence landscapes, and entropy-based summaries, alongside new topological descriptors tailored for high-dimensional graphs, to encode changes in connected components, cycles, and higher-dimensional holes as a function of model parameters like edge probability, degree constraints, and higher-order interaction terms. We integrate supervised and unsupervised learning to map topological summaries to phase domains and critical points, exploiting kernelized and deep learning architectures to handle the nonlinearity and high dimensionality of the feature space. Our methodology also incorporates stability analysis with respect to perturbations in data and parameter settings, ensuring robustness against sampling noise and finite-size effects. The research investigates several random graph models, including Erd?s–RΓ©nyi, stochastic block models, and sparse high-order interaction networks generated via hypergraphs, to evaluate the universality and limitations of topological indicators in signaling phase transitions. Key theoretical contributions include the development of multiscale topological descriptors that capture when the network undergoes fragmentation, emerging giant components, and the formation of cohesive higher-order motifs. We derive asymptotic relationships between topological invariants and phase transition thresholds, and establish conditions under which Persistent Homology features exhibit sharp or smooth transitions across parameter sweeps. Empirically, we demonstrate that combining TDA features with machine learning classifiers enhances precision and recall in identifying critical regions, outperforming baseline graph statistics in noisy high-dimensional settings. The work includes a comprehensive computational pipeline with scalable algorithms for large graphs, leveraging parallel processing and optimized persistent homology libraries. We perform a thorough sensitivity analysis to assess the impact of filtration choices, noise, and sample size on the stability and interpretability of the topological signals. Potential applications span network science, materials physics, and data-driven design of complex systems where phase-transition-like behavior governs functionality. The results offer a principled, geometry-aware lens to detect and quantify critical phenomena in high-dimensional networks, providing robust tools for researchers seeking to understand and predict phase transitions through the geometry of data.

Project Overview

What This Project Is About

In simple terms, this project looks at how complicated networks (graphs) behave when they grow very large or have many connections. It combines a mathematical way of studying shapes (topology) with modern data analysis techniques to spot smooth changes, called phase transitions, as the network changes. It also uses machine learning to recognize patterns that indicate those transitions.



The Problem It Addresses

Many real-world networks can change abruptly as their connections increase or decrease, but it’s often hard to predict when these changes happen just by counting links. This project fills that gap by using a shape-based view of data to detect subtle signs of transitions, which can improve understanding in fields like physics, biology, and social networks.



Objectives of the Project


  1. Identify how high-dimensional networks transition from one state to another.
  2. Apply persistent homology to capture stable topological features across scales.
  3. Combine topological features with simple machine learning models to classify phases.
  4. Evaluate which features best indicate a phase transition.
  5. Provide a framework that is accessible to students with minimal topology background.


What You Will Do Step by Step


  1. Study basic graph concepts and introduce the idea of higher-dimensional connectivity.
  2. Generate or collect synthetic and real network data with varying connection strengths.
  3. Compute persistent homology features from network representations.
  4. Train simple machine learning models to detect phases using topological features.
  5. Validate findings with known transition points and perform sensitivity checks.
  6. Interpret results with clear, non-technical explanations.
  7. Document methodology and provide reproducible code.


Expected Outcome


The project should deliver a practical method to detect phase transitions in large networks using topology-informed features, plus a straightforward demonstration using examples. It will offer insights into which topological signals are most informative and provide guidance for future studies and potential applications in data science and network science.

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